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snakemake
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How can I globally set stderr and stdout redirection into log files in Snakemake?
user_1726986
0
•
asked Dec 26, 2018
5
0
540
snakemake
How does Snakemake parse slurm jobid with --cluster-status and sacct used
user_6049644
0
•
asked Dec 23, 2018
3
1
554
snakemake
slurm
Snakemake Using expand with dictionary
user_1798298
0
•
asked Nov 13, 2018
2
2
2036
expand
snakemake
Printing simplified DAG plot with snakemake
user_1386500
0
•
asked Nov 13, 2018
11
1
5432
snakemake
snakemake rule calls a shell script but exits after first command
user_9659451
0
•
asked Nov 10, 2018
3
1
709
snakemake
for-loop
shell
Arithmetic on "threads" wildcard in rule definition
user_459780
0
•
asked Oct 30, 2018
3
1
252
snakemake
multithreading
python
Snakemake wants to run job although output file already exists
user_459780
0
•
asked Sep 19, 2018
5
1
1320
snakemake
offline
python
Snakemake: Ignore Rprofile when executing an R script
user_5112329
0
•
asked Sep 17, 2018
4
2
555
snakemake
r
Is it possible to print commands instead of rules in snakemake dry run?
user_2962344
0
•
asked Nov 21, 2017
4
2
3042
snakemake
using conda environments in simple snakemake workflows
user_8933479
0
•
asked Nov 13, 2017
3
1
991
snakemake
conda
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