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snakemake

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In snakemake, how do you use wildcards with scatter-gather processes?
user_146636250
• asked Nov 18, 2020
2
1
412
snakemake wildcard
How to check if two turtles have the same x, y coordinates on turtle graphics?
user_134067180
• asked Nov 15, 2020
2
3
542
snakemake turtle-graphics python
Conda environment is not activated in snakemake for rules declared as local
user_24967520
• asked Oct 31, 2020
4
1
475
snakemake conda
Best way for installing non-conda dependencies in Snakemake conda environments
user_70768190
• asked Oct 31, 2020
5
1
1136
snakemake conda python
Best practices for (bio)conda versions in Snakemake wrappers?
user_843490
• asked Oct 29, 2020
3
1
457
snakemake conda
Snakemake: {input:q} does not return quoted input
user_145253010
• asked Oct 26, 2020
2
2
245
sequencing quotation-marks snakemake input
ERROR: (gcloud.container.clusters.create) ResponseError: code=400, message=Failed
user_145118590
• asked Oct 26, 2020
3
2
3688
snakemake kubernetes
NameError when ues awk in snakemake
user_144530060
• asked Oct 15, 2020
2
1
385
snakemake
Accessing file path from a config.yaml in Snakemake
user_144529410
• asked Oct 15, 2020
2
0
284
snakemake
'Wildcards' object has no attribute 'output'
Admin1
• asked Oct 12, 2020
2
1
423
snakemake rules output wildcard shell
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