snakemake

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Snakemake: do not resolve wildcards in input
user_141110180
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2
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159
snakemake python
How do I make snakemake rebuild missing inputs?
user_141017890
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2
1
123
snakemake
Snakemake, RNA-seq : How can I execute one subpart of a pipeline or another subpart based on the characteristics of the sample that is analysed?
user_140608030
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2
1
451
rna-seq snakemake
Snakemake : Can I access wildcards outside of rules?
user_140608030
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3
1
261
snakemake
problem with snakemake submitting jobs with multiple wildcard on SGE
user_29623440
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5
1
572
sungridengine snakemake cluster-computing
Rule in snakemake using singularity: unterminated quoted string
user_80513070
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3
0
243
singularity-container snakemake docker
Snakemake change conda activation command to 'conda activate'
user_132681600
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2
1
266
snakemake conda fish bash
snakemake: How to use glob_wildcards for newly created files?
user_102993850
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2
1
3258
snakemake python
String formatting of wildcards within output strings
user_23024520
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4
1
620
snakemake
Symlink (auto-generated) directories via Snakemake
user_24512380
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7
2
579
snakemake symlink directory makefile python
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