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snakemake
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Use expand in python to create string with multiple paired variables (snakemake)
user_12559770
0
•
asked Aug 23, 2022
2
1
31
wildcard-expansion
expand
snakemake
list-comprehension
python
Reserved name in Snakemake?
user_10950656
0
•
asked Aug 22, 2022
1
1
35
snakemake
python-3.x
list
python
Snakemake: Execute rule based on value of wildcard
user_1114453
0
•
asked Aug 19, 2022
1
3
44
wildcard-constraints
snakemake
workflow
wildcard
python
Manually created snakemake wildcards not used/recognized
user_19151408
0
•
asked Aug 10, 2022
2
3
69
wildcard-expansion
snakemake
wildcard
python
Perl installed via conda snakemake shell error: Can´t open perl script .. no such file or directory
user_19724523
0
•
asked Aug 9, 2022
4
2
69
snakemake
anaconda
perl
shell
Is there a function in snakemake to make the list of output dependent on the arguments passed into the shell command
user_11747257
0
•
asked Aug 8, 2022
1
2
56
wildcard-expansion
snakemake
directed-acyclic-graphs
python
Rule-specific scattergather directive
user_19716194
0
•
asked Aug 8, 2022
2
1
48
wildcard-expansion
snakemake
directed-acyclic-graphs
python-3.x
python
Use a shell script to obtain a params for every wildcard
user_10798015
0
•
asked Aug 6, 2022
1
2
62
wildcard-expansion
snakemake
wildcard
python
Wrong snakemake glob_wilcards and wildcard_constraints
user_19151408
0
•
asked Aug 5, 2022
1
2
58
wildcard-expansion
snakemake
glob
python
Using Snakemake to handle SLURM directives without running processes on login node
user_19701548
0
•
asked Aug 5, 2022
1
2
36
snakemake
slurm
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