In emacs stack-ghci cannot load interface files but `stack build` from the command line does

I can stack build a project from the command line but when I try C-c C-l in emacs (with (custom-set-variables '(haskell-process-type 'stack-ghci))) I get an error that all the package modules I import can't be found.

/home/amcp011/bec/amcp011/accelerate/gpe/src/Numeric/GPE/Utils.hs:30:1: error:
    Failed to load interface for ‘Data.Array.Accelerate’
    Locations searched:
      Data/Array/Accelerate.hs
      Data/Array/Accelerate.lhs
      Data/Array/Accelerate.hsig
      Data/Array/Accelerate.lhsig
      /home/amcp011/bec/amcp011/accelerate/gpe/src/Data/Array/Accelerate.hs
      /home/amcp011/bec/amcp011/accelerate/gpe/src/Data/Array/Accelerate.lhs
      /home/amcp011/bec/amcp011/accelerate/gpe/src/Data/Array/Accelerate.hsig
      /home/amcp011/bec/amcp011/accelerate/gpe/src/Data/Array/Accelerate.lhsig

gpe.cabal:

build-depends:       base >= 4.7 && < 5
                   , bytestring
                   , bytestring-conversion
                   , mtl
                   , time
                   , filepath
                   , directory
                   , accelerate
                   , accelerate-io

stack.yaml:

extra-deps: [accelerate-1.0.0.0
            ,accelerate-io-1.0.0.0
            ]