How to automate Intellij project configuration

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I have the use case where I have several projects (several product versions), and I want to automate the project setup for me and my team.

Is there a way to programmatically setup an Intellij project by using some Intellij API(Intellij plugin / shell script)?

For example: Set run configuration with tomcat with different versions, Maven configuration, Perforce configuration

I know that I can manipulate .xml files in the project / Intellij but it feels dirty...

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