In Python I'm using SciPy for a one sample t test:
from scipy import stats
one_sample_data = [177.3, 182.7, 169.6, 176.3, 180.3, 179.4, 178.5, 177.2, 181.8, 176.5]
one_sample = stats.ttest_1samp(one_sample_data, 175.3)
This is a two tailed test, but I can't see an option in scipy.stats.ttest_1samp to do a one tailed test.
In R if I was using t.test() I would simply set alternative="less" (or "greater"). What's the easiest way to do this in Python?
Based on the link provided in the comments, I would do the following:
from scipy import stats
def one_sample_one_tailed(sample_data, popmean, alpha=0.05, alternative='greater'):
t, p = stats.ttest_1samp(sample_data, popmean)
print ('t:',t)
print ('p:',p)
if alternative == 'greater' and (p/2 < alpha) and t > 0:
print ('Reject Null Hypothesis for greater-than test')
if alternative == 'less' and (p/2 < alpha) and t < 0:
print ('Reject Null Hypothesis for less-thane test')
sample_data = [177.3, 182.7, 169.6, 176.3, 180.3, 179.4, 178.5, 177.2, 181.8, 176.5]
one_sample_one_tailed(sample_data,175.3)
this gives the output:
t: 2.295568968083183
p: 0.04734137339747034
Reject Null Hypothesis for greater-than test
This solution is based on the accepted answer in the link:
It goes on to say that scipy always gives the test statistic as signed. This means that given p and t values from a two-tailed test, you would reject the null hypothesis of a greater-than test when p/2 < alpha and t > 0, and of a less-than test when p/2 < alpha and t < 0.
Now 'alternative' parameter available with the newest version of Scipy (>=1.6) Here is the link :
https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.ttest_1samp.html