Missing commits in repo on CircleCI container

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I'm using CircleCI to build an Android Github private project. Builds work fine but the commit history of origin/master on the container is different from what I get on my local machine.

I did a diff b/w output of git rev-list origin/master on my local machine and container and found quite a few differences - i.e. there are commits missing in the repo on the container.

I tried cloning the project from Github to my local machine and it showed me the same git commit history (correct commit count), is CircleCI doing something different?

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