Flash Builder deactivates breakpoints (sometimes)

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For many of my Flash Builder (4.0, 4.5 or 4.6) projects, after a while Flash Builder debugger starts ignoring the breakpoints I placed. When this happens, the breakpoints show up as just a blue dot, instead of a blue dot with a checkmark on it.

All new breakpoints I place after the swf starts, work.

I suspect that it has something to do with the fact that I attach the debugger to a swf running on a server. In the Run/Debug Settings, the url is "http://localhost/xxxxx" instead of direct link to the swf.

As I mention, this doesn't happen all the time. Sometimes, the breakpoints I placed a few hours ago start working.

It is especially annoying when I want to stop at a breakpoint during the initialization.

Anybody has any idea what is causing this and how to get around it?

Thanks.

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