I'm a little befuddled with a script I've been writing - and would appreciate some help! This is one of those cases where each command seems to work fine on their own, but not so when put together into a script. Here's a gist of what I'm trying to do:
input=$1
single_func () {
command "$input"
}
multi_func () {
xargs < $input -n 1 single_func
}
if [[ "$input" == name1* || name2* ]];
then
single_func
elif [[ -f "$input" ]];
then
multi_func
else
echo "exiting"
exit
fi
The idea here is - if the script is invoked with ./script.sh input, if will run if the input starts with name1 or name2, using single_func. If the input provided doesn't start with name1 or name2, and is a file containing a list of items, elif will run (reason for -f) using multi_fuc, which is just single_func running with xarg on the provided file.
The 'single_func' component runs on the command line fine on its own (command "input"), and the 'multi_func' component runs fine with a test file (xargs < testfile.txt -n 1 ./single_func.sh). But when I put them together as above and try to run them together, only the first 'if' part works correctly. When provided with a file or some nonsense line not containing name1 or name2, the script simply exits without returning anything.
For the curious, I'm running entrez direct commands within the single_func block.
What am I doing wrong?