Coregister 3D Nifti Images

Vibe98 0
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I've two 3D nifti images, a Flair image of size 29x512x512, and a dwi image, of size 73x112x112, and I would like to coregister the flair image to the dwi image. Do you know a possible way to do that? I'm working with Python but any well explained method would be fine

nifti image-registration image-resizing python
1 Answers

there are loads of ways to do that:

  1. using the program FSL, registration in FLIRT, works in Linux
  2. using the program SPM (requires matlab)
  3. Elastix, a command-line program that also has Python bindings
  4. ANTs, also command-line, with possible Python bindings (via nipype)

but there are many more. For a good overview and a very recent method (MMORF), you may want to look at this document.

alle_meije0
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