Github Pull Request Issue: Syncing Fork (Automation)

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I have a fork from a repo that is constantly updated, so I created a new workflow with an automated upstream sync .yml file.

The fork is to be synced twice daily.

Everything works fine, except the .yml file is showing on each Pull Request, and obviously, the repository owner doesn't want that file.

I am using Github Desktop, in the repository settings, I added *.yml to the gitignore list of files not to be submitted in a PR, but even after this the .yml file is style showing on PR's.

Any help would be much appreciated.

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