nextflow

72 Questions
Newest Active Unanswered Frequent
Score
View
Card Compact
Snakemake explicit handling for Out Of Memory (OOM) failures
user_172005540
•
3
1
114
nextflow snakemake
`errorStrategy` setting to stop current process but continue pipeline
user_39383600
•
3
1
453
nextflow
Nextflow "flatten" analogous to "unnest" in dplyr
user_12596750
•
1
1
142
nextflow unnest
How to specify a scratch output directory in Nextflow?
user_45047110
•
2
1
483
nextflow
How to download a list of `FastQ` files in `Nextflow` using `fromSRA` function?
user_25722870
•
2
1
222
nextflow bioinformatics
Nextflow: how should I truncate a fastq file at line X? Process fails with error 141
user_153696440
•
2
2
133
nextflow bioinformatics sed groovy bash
Saving the contents of a file generated inside process script into Nextflow variable
user_153696440
•
4
2
407
nextflow bioinformatics groovy bash
Import own python modules in nextflow script block?
user_97341890
•
2
1
283
nextflow python
nextflow does not find all my python modules
user_17232310
•
3
1
447
nextflow import python-3.x
Does NextFlow work for file-oriented cases?
user_5292860
•
1
1
288
nextflow
Hot Questions