Command PhaseScriptExecution failed with a nonzero exit code when flutter run in debug

I have a Flutter project which runs perfectly in v2.3.3. I upgraded the flutter version to 3.0.0 in order to use null safety feature. I solved every errors. However when I ran the project, I got Command PhaseScriptExecution failed with a nonzero exit code error. I couldn't find any reasonable and logical solutions throughout internet. Could you please help me on this issue?

Launching lib/main.dart on iPhone SE (3rd generation) in debug mode...
Running pod install...                                              5.7s
Running Xcode build...                                                  
Xcode build done.                                           18.1s
Failed to build iOS app
Error output from Xcode build:
↳
    2022-05-16 15:32:57.974 xcodebuild[72650:368105] Requested but did not find extension point with identifier Xcode.IDEKit.ExtensionSentinelHostApplications for extension
    Xcode.DebuggerFoundation.AppExtensionHosts.watchOS of plug-in com.apple.dt.IDEWatchSupportCore
    2022-05-16 15:32:57.974 xcodebuild[72650:368105] Requested but did not find extension point with identifier Xcode.IDEKit.ExtensionPointIdentifierToBundleIdentifier for extension
    Xcode.DebuggerFoundation.AppExtensionToBundleIdentifierMap.watchOS of plug-in com.apple.dt.IDEWatchSupportCore
    ** BUILD FAILED **


Xcode's output:
↳
    Writing result bundle at path:
        /var/folders/00/r0s0tm0x1s33__6xjw2fml1r0000gn/T/flutter_tools.EYRty2/flutter_ios_build_temp_dir7bCY7C/temporary_xcresult_bundle

    ld: warning: linking against a dylib which is not safe for use in application extensions:
    /Users/****/Projects/ES.Online.Mobile/build/ios/Debug-iphonesimulator/XCFrameworkIntermediates/InsiderMobileAdvancedNotification/InsiderMobileAdvancedNotification.framework/Ins
    iderMobileAdvancedNotification
    ld: warning: linking against a dylib which is not safe for use in application extensions:
    /Users/****/Projects/ES.Online.Mobile/build/ios/Debug-iphonesimulator/XCFrameworkIntermediates/InsiderMobileAdvancedNotification/InsiderMobileAdvancedNotification.framework/Ins
    iderMobileAdvancedNotification
    ld: warning: linking against a dylib which is not safe for use in application extensions:
    /Users/****/Projects/ES.Online.Mobile/build/ios/Debug-iphonesimulator/XCFrameworkIntermediates/InsiderMobileAdvancedNotification/InsiderMobileAdvancedNotification.framework/Ins
    iderMobileAdvancedNotification
    ld: warning: linking against a dylib which is not safe for use in application extensions:
    /Users/****/Projects/ES.Online.Mobile/build/ios/Debug-iphonesimulator/XCFrameworkIntermediates/InsiderMobileAdvancedNotification/InsiderMobileAdvancedNotification.framework/Ins
    iderMobileAdvancedNotification

    Failed to package /Users/****/Projects/ES.Online.Mobile.
    Command PhaseScriptExecution failed with a nonzero exit code
    note: Using new build system
    note: Planning
    note: Build preparation complete
    note: Building targets in dependency order
    /Users/****/Projects/ES.Online.Mobile/ios/Pods/Pods.xcodeproj: warning: The iOS Simulator deployment target 'IPHONEOS_DEPLOYMENT_TARGET' is set to 8.0, but the range of
    supported deployment target versions is 9.0 to 15.4.99. (in target 'ReachabilitySwift' from project 'Pods')
    /Users/****/Projects/ES.Online.Mobile/ios/Pods/Pods.xcodeproj: warning: The iOS Simulator deployment target 'IPHONEOS_DEPLOYMENT_TARGET' is set to 8.0, but the range of
    supported deployment target versions is 9.0 to 15.4.99. (in target 'FMDB' from project 'Pods')

    Result bundle written to path:
        /var/folders/00/r0s0tm0x1s33__6xjw2fml1r0000gn/T/flutter_tools.EYRty2/flutter_ios_build_temp_dir7bCY7C/temporary_xcresult_bundle


Could not build the application for the simulator.
Error launching application on iPhone SE (3rd generation).

flutter doctor -v output:

[✓] Flutter (Channel stable, 3.0.0, on macOS 12.3.1 21E258 darwin-x64, locale en-TR)
    • Flutter version 3.0.0 at /Users/****/Developer/flutter
    • Upstream repository https://github.com/flutter/flutter.git
    • Framework revision ee4e09cce0 (7 days ago), 2022-05-09 16:45:18 -0700
    • Engine revision d1b9a6938a
    • Dart version 2.17.0
    • DevTools version 2.12.2

[✓] Android toolchain - develop for Android devices (Android SDK version 29.0.2)
    • Android SDK at /Users/****/Library/Android/sdk
    • Platform android-30, build-tools 29.0.2
    • Java binary at: /Applications/Android Studio.app/Contents/jre/jdk/Contents/Home/bin/java
    • Java version OpenJDK Runtime Environment (build 1.8.0_202-release-1483-b49-5587405)
    • All Android licenses accepted.

[✓] Xcode - develop for iOS and macOS (Xcode 13.3.1)
    • Xcode at /Applications/Xcode.app/Contents/Developer
    • CocoaPods version 1.11.3

[✓] Chrome - develop for the web
    • Chrome at /Applications/Google Chrome.app/Contents/MacOS/Google Chrome

[✓] Android Studio (version 3.5)
    • Android Studio at /Applications/Android Studio.app/Contents
    • Flutter plugin version 41.1.2
    • Dart plugin version 191.8593
    • Java version OpenJDK Runtime Environment (build 1.8.0_202-release-1483-b49-5587405)

[✓] VS Code (version 1.67.1)
    • VS Code at /Applications/Visual Studio Code.app/Contents
    • Flutter extension version 3.40.0

[✓] Connected device (3 available)
    • iPhone SE (3rd generation) (mobile) • 33A8F736-A4EA-41E7-8567-408A051F9952 • ios            • com.apple.CoreSimulator.SimRuntime.iOS-15-4 (simulator)
    • macOS (desktop)                     • macos                                • darwin-x64     • macOS 12.3.1 21E258 darwin-x64
    • Chrome (web)                        • chrome                               • web-javascript • Google Chrome 101.0.4951.64

[✓] HTTP Host Availability
    • All required HTTP hosts are available

• No issues found!